Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4bQ9D8B3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm6963-201ENSMUST00000147879 379 ntBASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm3961-201ENSMUST00000204425 994 ntBASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Gm44913-201ENSMUST00000208060 2990 ntBASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp4bQ9D8B3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Gm5419-201ENSMUST00000119301 527 ntBASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Gm5070-201ENSMUST00000177599 862 ntBASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.17■□□□□ 0.02
Chmp4bQ9D8B3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms