Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
U2af1Q9D883 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
U2af1Q9D883 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
U2af1Q9D883 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
U2af1Q9D883 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
U2af1Q9D883 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
U2af1Q9D883 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.83■□□□□ 0.12
U2af1Q9D883 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm12196-201ENSMUST00000120954 262 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm12566-201ENSMUST00000121479 359 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Mir3102-201ENSMUST00000175555 104 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Mir6979-201ENSMUST00000183927 56 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm28686-201ENSMUST00000187404 609 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm7848-201ENSMUST00000210739 718 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.82■□□□□ 0.12
U2af1Q9D883 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
U2af1Q9D883 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
U2af1Q9D883 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Gm11450-201ENSMUST00000121144 333 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Gm42599-201ENSMUST00000201308 469 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Gm5369-201ENSMUST00000217499 588 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.81■□□□□ 0.12
U2af1Q9D883 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
U2af1Q9D883 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
U2af1Q9D883 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.8■□□□□ 0.12
U2af1Q9D883 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.8■□□□□ 0.12
U2af1Q9D883 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.8■□□□□ 0.12
U2af1Q9D883 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.8■□□□□ 0.12
U2af1Q9D883 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.8■□□□□ 0.12
U2af1Q9D883 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.8■□□□□ 0.12
U2af1Q9D883 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.8■□□□□ 0.12
U2af1Q9D883 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.8■□□□□ 0.12
U2af1Q9D883 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.8■□□□□ 0.12
U2af1Q9D883 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.8■□□□□ 0.12
U2af1Q9D883 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Gm21811-201ENSMUST00000096485 930 ntBASIC15.8■□□□□ 0.12
U2af1Q9D883 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms