Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Gm45930-201ENSMUST00000221330 292 ntBASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4cQ9D7F7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm24548-201ENSMUST00000158650 108 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm2546-201ENSMUST00000182630 991 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm27572-201ENSMUST00000183702 255 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm37201-201ENSMUST00000191845 523 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm43133-201ENSMUST00000197472 463 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Gm37368-201ENSMUST00000193173 3212 ntBASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp4cQ9D7F7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm44958-201ENSMUST00000203734 736 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm10608-202ENSMUST00000213924 676 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp4cQ9D7F7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms