Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm37008-201ENSMUST00000195712 319 ntBASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm18062-201ENSMUST00000208020 547 ntBASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm18055-201ENSMUST00000208254 547 ntBASIC12.17□□□□□ -0.46
Ccdc130Q9D516 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm5781-201ENSMUST00000219792 443 ntBASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.17□□□□□ -0.46
Ccdc130Q9D516 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc130Q9D516 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Gm24231-201ENSMUST00000104315 133 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Rmrp-201ENSMUST00000157463 271 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc130Q9D516 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc130Q9D516 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 188.8 ms