Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Pck2-205ENSMUST00000226352 2784 ntBASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Gm15573-201ENSMUST00000119487 540 ntBASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Gm44545-201ENSMUST00000208262 746 ntBASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.36□□□□□ -0.11
Stag1Q9D3E6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stag1Q9D3E6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm15610-201ENSMUST00000120584 195 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm15595-201ENSMUST00000120840 961 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm13263-201ENSMUST00000121271 838 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm12208-201ENSMUST00000122004 163 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm5706-201ENSMUST00000181525 993 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stag1Q9D3E6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms