Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm11964-201ENSMUST00000120982 444 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm12363-201ENSMUST00000122250 668 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm4034-201ENSMUST00000187674 480 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm19163-201ENSMUST00000223313 780 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim13Q9CYB0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim13Q9CYB0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.15□□□□□ -0.63
Trim13Q9CYB0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms