Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm11700-201ENSMUST00000119409 403 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm11591-201ENSMUST00000120063 702 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm5866-201ENSMUST00000177881 973 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm9002-201ENSMUST00000178437 499 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm27847-201ENSMUST00000183711 107 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm27375-201ENSMUST00000183799 107 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm7561-201ENSMUST00000211203 886 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm9908-201ENSMUST00000211534 448 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssu72Q9CY97 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Gm6114-201ENSMUST00000182472 968 ntBASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Gm807-202ENSMUST00000224929 408 ntBASIC11.93□□□□□ -0.5
Ssu72Q9CY97 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms