Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx47Q9CWX9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx47Q9CWX9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm12314-201ENSMUST00000118104 538 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm11439-201ENSMUST00000118598 409 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms