Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Gm5706-201ENSMUST00000181525 993 ntBASIC13.74□□□□□ -0.21
Trim11Q99PQ2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim11Q99PQ2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm11222-201ENSMUST00000119005 738 ntBASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm18935-201ENSMUST00000212692 664 ntBASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm30285-201ENSMUST00000214614 422 ntBASIC13.73□□□□□ -0.21
Trim11Q99PQ2 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.73□□□□□ -0.21
Trim11Q99PQ2 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.73□□□□□ -0.21
Trim11Q99PQ2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Gm10478-201ENSMUST00000084451 396 ntBASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim11Q99PQ2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms