Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm15549-201ENSMUST00000121595 622 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm6755-201ENSMUST00000100598 864 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm6740-201ENSMUST00000100617 864 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm15626-201ENSMUST00000117478 868 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm38233-201ENSMUST00000194259 807 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Gm5650-201ENSMUST00000209641 598 ntBASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh23Q99PF4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.9□□□□□ -0.5
Cdh23Q99PF4 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gm13281-201ENSMUST00000120871 567 ntBASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh23Q99PF4 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
Cdh23Q99PF4 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Mir1941-201ENSMUST00000157834 83 ntBASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh23Q99PF4 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Mir874-201ENSMUST00000104769 76 ntBASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Gm5040-201ENSMUST00000218609 800 ntBASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh23Q99PF4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms