Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Mir669p-2-201ENSMUST00000103868 87 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Mir669p-1-201ENSMUST00000103884 87 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Gm14550-201ENSMUST00000117918 407 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Gm26083-201ENSMUST00000157904 193 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Mospd4-201ENSMUST00000180618 576 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Gm7443-201ENSMUST00000206355 378 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 AC134860.5-201ENSMUST00000225071 1249 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 AC107711.3-201ENSMUST00000228939 1035 ntBASIC16.07■□□□□ 0.16
Rtn4Q99P72 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4Q99P72 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm13297-201ENSMUST00000120205 934 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm14381-201ENSMUST00000122105 414 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm7344-201ENSMUST00000212122 1222 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 AC167202.1-201ENSMUST00000219027 331 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.06■□□□□ 0.16
Rtn4Q99P72 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4Q99P72 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms