Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm22042-201ENSMUST00000082989 165 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm26232-201ENSMUST00000083360 166 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm24136-201ENSMUST00000083374 165 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm26110-201ENSMUST00000083971 165 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.76□□□□□ -0.53
Msh4Q99MT2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Msh4Q99MT2 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm14109-201ENSMUST00000118814 309 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm14832-201ENSMUST00000121289 322 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm24845-201ENSMUST00000158034 109 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm28882-201ENSMUST00000185504 314 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm38317-201ENSMUST00000195564 343 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm13097-201ENSMUST00000210722 397 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.75□□□□□ -0.53
Msh4Q99MT2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Msh4Q99MT2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm15276-201ENSMUST00000145953 498 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms