Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm21092-201ENSMUST00000178995 955 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm4654-201ENSMUST00000183305 982 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm3551-201ENSMUST00000190750 664 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm39404-201ENSMUST00000216350 313 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col25a1Q99MQ5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm11989-201ENSMUST00000117240 672 ntBASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm11362-201ENSMUST00000118838 850 ntBASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm25677-201ENSMUST00000174983 72 ntBASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm37458-201ENSMUST00000194055 410 ntBASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.53□□□□□ -0.4
Col25a1Q99MQ5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms