Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm13916-201ENSMUST00000117368 628 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Gm22920-201ENSMUST00000102175 109 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Gm14193-201ENSMUST00000105067 153 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Gm5621-201ENSMUST00000187303 640 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Gm19009-201ENSMUST00000223072 823 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Mir483-201ENSMUST00000093631 73 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx6-1Q99MA9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm14219-201ENSMUST00000120414 288 ntBASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms