Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Gm11793-201ENSMUST00000120433 981 ntBASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cstf3Q99LI7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm14832-201ENSMUST00000121289 322 ntBASIC11.66□□□□□ -0.54
Cstf3Q99LI7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm42627-201ENSMUST00000197347 224 ntBASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm7046-201ENSMUST00000221351 977 ntBASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cstf3Q99LI7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Gm13786-201ENSMUST00000122371 333 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms