Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm13035-201ENSMUST00000117496 342 ntBASIC13.97□□□□□ -0.17
Smc1bQ920F6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm12291-201ENSMUST00000121627 311 ntBASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.97□□□□□ -0.17
Smc1bQ920F6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.97□□□□□ -0.17
Smc1bQ920F6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Smc1bQ920F6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc1bQ920F6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Gm14644-201ENSMUST00000116671 647 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Gm11941-201ENSMUST00000119904 610 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Gm5616-201ENSMUST00000165252 384 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Gm8741-201ENSMUST00000174736 384 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.96□□□□□ -0.17
Smc1bQ920F6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1bQ920F6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.96□□□□□ -0.18
Smc1bQ920F6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.96□□□□□ -0.18
Smc1bQ920F6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1bQ920F6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.95□□□□□ -0.18
Smc1bQ920F6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms