Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gm18935-201ENSMUST00000212692 664 ntBASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.81□□□□□ -0.52
Pcdhb8Q91XZ2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm18711-201ENSMUST00000199341 750 ntBASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb8Q91XZ2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Gm26956-201ENSMUST00000182176 986 ntBASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb8Q91XZ2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms