Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm11793-201ENSMUST00000120433 981 ntBASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm6013-201ENSMUST00000212264 699 ntBASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Pcdhga3Q91XY5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm13392-201ENSMUST00000117708 150 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm14999-201ENSMUST00000121039 624 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm13786-201ENSMUST00000122371 333 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm2546-201ENSMUST00000182630 991 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm43118-201ENSMUST00000199149 775 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm44958-201ENSMUST00000203734 736 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm44882-201ENSMUST00000205702 802 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms