Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm5455-201ENSMUST00000058710 715 ntBASIC12.55□□□□□ -0.4
Usp3Q91W36 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.55□□□□□ -0.4
Usp3Q91W36 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp3Q91W36 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.55□□□□□ -0.4
Usp3Q91W36 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm12164-201ENSMUST00000121695 551 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm27341-201ENSMUST00000183570 106 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm29615-201ENSMUST00000185371 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28224-201ENSMUST00000186078 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm29001-201ENSMUST00000186177 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28292-201ENSMUST00000186593 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28101-201ENSMUST00000187608 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm29076-201ENSMUST00000187689 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28302-201ENSMUST00000187931 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28646-201ENSMUST00000188220 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28205-201ENSMUST00000189177 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm29032-201ENSMUST00000189797 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm28695-201ENSMUST00000190300 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm37448-201ENSMUST00000192795 697 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm37466-201ENSMUST00000195692 652 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm43962-201ENSMUST00000203898 190 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm5363-201ENSMUST00000211927 938 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm8385-201ENSMUST00000058999 643 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp3Q91W36 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.54□□□□□ -0.4
Usp3Q91W36 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp3Q91W36 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usp3Q91W36 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm16044-201ENSMUST00000118475 450 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm16505-201ENSMUST00000179981 232 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp3Q91W36 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 AC132104.1-201ENSMUST00000213615 260 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp3Q91W36 AC152169.2-201ENSMUST00000224558 613 ntBASIC12.53□□□□□ -0.4
Usp3Q91W36 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms