Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Gm19187-201ENSMUST00000206781 892 ntBASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm24231-201ENSMUST00000104315 133 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm12566-201ENSMUST00000121479 359 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm37666-201ENSMUST00000194110 866 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx41Q91VN6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Gm17812-201ENSMUST00000204935 318 ntBASIC13.87□□□□□ -0.19
Ddx41Q91VN6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx41Q91VN6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms