Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.46□□□□□ -0.41
Trim60Q8VI40 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim60Q8VI40 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Gm38241-201ENSMUST00000192641 898 ntBASIC12.46□□□□□ -0.41
Trim60Q8VI40 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim60Q8VI40 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.46□□□□□ -0.41
Trim60Q8VI40 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.46□□□□□ -0.41
Trim60Q8VI40 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim60Q8VI40 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.46□□□□□ -0.41
Trim60Q8VI40 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.46□□□□□ -0.41
Trim60Q8VI40 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.46□□□□□ -0.42
Trim60Q8VI40 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim60Q8VI40 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Gm15610-201ENSMUST00000120584 195 ntBASIC12.45□□□□□ -0.42
Trim60Q8VI40 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.45□□□□□ -0.42
Trim60Q8VI40 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Gm6266-201ENSMUST00000203844 806 ntBASIC12.45□□□□□ -0.42
Trim60Q8VI40 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.45□□□□□ -0.42
Trim60Q8VI40 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim60Q8VI40 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms