Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm37489-201ENSMUST00000191883 159 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm18062-201ENSMUST00000208020 547 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm18055-201ENSMUST00000208254 547 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm45880-201ENSMUST00000213041 853 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Gm19309-201ENSMUST00000218295 205 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps39Q8R5L3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms