Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vopp1Q8R1C3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm25148-201ENSMUST00000104611 123 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm15615-201ENSMUST00000118876 198 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm11675-201ENSMUST00000121873 832 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm5100-201ENSMUST00000195631 589 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm43852-201ENSMUST00000202098 917 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.6□□□□□ -0.39
Vopp1Q8R1C3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm4294-201ENSMUST00000105169 614 ntBASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm15744-201ENSMUST00000161734 213 ntBASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm8492-201ENSMUST00000182375 987 ntBASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.59□□□□□ -0.39
Vopp1Q8R1C3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms