Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Treml1Q8K558 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Treml1Q8K558 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Treml1Q8K558 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Treml1Q8K558 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Treml1Q8K558 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Treml1Q8K558 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Treml1Q8K558 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Treml1Q8K558 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm18711-201ENSMUST00000199341 750 ntBASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.86□□□□□ -0.51
Treml1Q8K558 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.86□□□□□ -0.51
Treml1Q8K558 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.86□□□□□ -0.51
Treml1Q8K558 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.86□□□□□ -0.51
Treml1Q8K558 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Treml1Q8K558 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml1Q8K558 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Gm13996-201ENSMUST00000118456 430 ntBASIC11.85□□□□□ -0.51
Treml1Q8K558 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Gm27390-201ENSMUST00000184516 176 ntBASIC11.85□□□□□ -0.51
Treml1Q8K558 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Gm4607-201ENSMUST00000206649 577 ntBASIC11.85□□□□□ -0.51
Treml1Q8K558 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Gm17931-201ENSMUST00000208132 634 ntBASIC11.85□□□□□ -0.51
Treml1Q8K558 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Treml1Q8K558 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.85□□□□□ -0.51
Treml1Q8K558 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml1Q8K558 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms