Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gm37489-201ENSMUST00000191883 159 ntBASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gm45880-201ENSMUST00000213041 853 ntBASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cchcr1Q8K2I2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Gm25214-201ENSMUST00000104573 129 ntBASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Gm29396-201ENSMUST00000185659 716 ntBASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Cchcr1Q8K2I2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm18062-201ENSMUST00000208020 547 ntBASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm17931-201ENSMUST00000208132 634 ntBASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm18055-201ENSMUST00000208254 547 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms