Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm6023-201ENSMUST00000118217 606 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm14441-201ENSMUST00000121960 540 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.74□□□□□ -0.69
ShfQ8CG80 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm8420-201ENSMUST00000097103 598 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.74□□□□□ -0.69
ShfQ8CG80 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
ShfQ8CG80 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm13226-201ENSMUST00000117838 404 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
ShfQ8CG80 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.73□□□□□ -0.69
ShfQ8CG80 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.73□□□□□ -0.69
ShfQ8CG80 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms