Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm22133-201ENSMUST00000102082 109 ntBASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc60Q8C4J0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc60Q8C4J0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc60Q8C4J0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc60Q8C4J0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc60Q8C4J0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc60Q8C4J0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc60Q8C4J0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm11511-201ENSMUST00000118146 540 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm14017-201ENSMUST00000121934 386 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm2260-201ENSMUST00000184965 657 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm8956-201ENSMUST00000203939 825 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm17827-201ENSMUST00000211825 742 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm8385-201ENSMUST00000058999 643 ntBASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc60Q8C4J0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc60Q8C4J0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms