Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm19287-201ENSMUST00000203190 358 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm11660-201ENSMUST00000120955 412 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm6114-201ENSMUST00000182472 968 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm4157-201ENSMUST00000211647 679 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm9797-202ENSMUST00000218003 294 ntBASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp44Q8C2S0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gm27530-201ENSMUST00000184096 98 ntBASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gm38314-201ENSMUST00000195709 625 ntBASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.06□□□□□ -0.16
Usp44Q8C2S0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp44Q8C2S0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms