Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm13809-201ENSMUST00000117921 597 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm7467-201ENSMUST00000185173 652 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Gm10774-201ENSMUST00000188689 204 ntBASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sh3rf2Q8BZT2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh3rf2Q8BZT2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Gm15131-201ENSMUST00000119124 595 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Gm19459-201ENSMUST00000176240 835 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Mir6546-201ENSMUST00000184460 62 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Mir7686-201ENSMUST00000200604 57 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Gm17931-201ENSMUST00000208132 634 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Gm45575-201ENSMUST00000210283 548 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms