Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm6612-201ENSMUST00000170777 395 ntBASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm7939-201ENSMUST00000201233 1050 ntBASIC9.39□□□□□ -0.91
Chd9Q8BYH8 BC080696-201ENSMUST00000202858 1218 ntBASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm8615-201ENSMUST00000025307 771 ntBASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Krtap6-3-201ENSMUST00000079151 444 ntBASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Chd9Q8BYH8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm14942-201ENSMUST00000119642 336 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm14048-201ENSMUST00000121864 1268 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm13039-201ENSMUST00000118638 794 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm10169-201ENSMUST00000121822 348 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Mir1905-201ENSMUST00000122779 82 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm28833-201ENSMUST00000189671 559 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm18124-201ENSMUST00000210695 706 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm23272-201ENSMUST00000104053 129 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Gm14829-201ENSMUST00000121499 1138 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd9Q8BYH8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm9954-202ENSMUST00000198686 4725 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms