Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm6905-201ENSMUST00000205729 511 ntBASIC16.94■□□□□ 0.3
Usp47Q8BY87 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.94■□□□□ 0.3
Usp47Q8BY87 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC16.94■□□□□ 0.3
Usp47Q8BY87 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Mir1943-201ENSMUST00000158276 73 ntBASIC16.93■□□□□ 0.3
Usp47Q8BY87 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Gm38151-201ENSMUST00000195085 289 ntBASIC16.93■□□□□ 0.3
Usp47Q8BY87 Gm6450-201ENSMUST00000200896 574 ntBASIC16.93■□□□□ 0.3
Usp47Q8BY87 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.93■□□□□ 0.3
Usp47Q8BY87 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp47Q8BY87 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 AC134860.1-201ENSMUST00000224867 660 ntBASIC16.92■□□□□ 0.3
Usp47Q8BY87 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp47Q8BY87 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Gm13916-201ENSMUST00000117368 628 ntBASIC16.91■□□□□ 0.3
Usp47Q8BY87 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Gm5852-201ENSMUST00000194119 1021 ntBASIC16.91■□□□□ 0.3
Usp47Q8BY87 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms