Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm10434-201ENSMUST00000101158 471 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm44364-201ENSMUST00000198368 141 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm6334-201ENSMUST00000207083 228 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm45865-201ENSMUST00000211815 945 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trerf1Q8BXJ2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm8018-201ENSMUST00000173536 789 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm6621-201ENSMUST00000193251 772 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm43758-201ENSMUST00000199500 367 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm7783-201ENSMUST00000204795 781 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Morn2-202ENSMUST00000227729 656 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms