Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Gm13736-201ENSMUST00000119272 253 ntBASIC14.15□□□□□ -0.14
Samm50Q8BGH2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Gm31256-201ENSMUST00000194705 506 ntBASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Samm50Q8BGH2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Samm50Q8BGH2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Gm14726-201ENSMUST00000120623 896 ntBASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Gm5950-201ENSMUST00000213337 772 ntBASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Samm50Q8BGH2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Samm50Q8BGH2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Samm50Q8BGH2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Samm50Q8BGH2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms