Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 AY036118-201ENSMUST00000200021 923 ntBASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm19287-201ENSMUST00000203190 358 ntBASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm8913-201ENSMUST00000209491 641 ntBASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.03□□□□□ -0.48
Rpp38Q80UU2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpp38Q80UU2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Gm11660-201ENSMUST00000120955 412 ntBASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpp38Q80UU2 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms