Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Gm21811-201ENSMUST00000096485 930 ntBASIC11.25□□□□□ -0.61
Pif1Q80SX8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm12501-201ENSMUST00000119163 529 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm15968-201ENSMUST00000119342 1168 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm14665-201ENSMUST00000122294 557 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm25881-201ENSMUST00000157783 103 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm270-201ENSMUST00000223010 976 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm43589-201ENSMUST00000199400 1523 ntBASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pif1Q80SX8 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms