Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm13611-201ENSMUST00000118269 318 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm14760-201ENSMUST00000121831 999 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm18734-201ENSMUST00000172937 808 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.93□□□□□ -0.5
Pcdh8Q7TSK3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm18038-201ENSMUST00000197900 485 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm43947-201ENSMUST00000203019 959 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm44124-201ENSMUST00000204159 472 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm7848-201ENSMUST00000210739 718 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Spcs1-203ENSMUST00000226374 592 ntBASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh8Q7TSK3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms