Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.8□□□□□ -0.84
Vma21Q78T54 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.8□□□□□ -0.84
Vma21Q78T54 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Vma21Q78T54 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Vma21Q78T54 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.79□□□□□ -0.84
Vma21Q78T54 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.79□□□□□ -0.84
Vma21Q78T54 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.79□□□□□ -0.84
Vma21Q78T54 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.79□□□□□ -0.84
Vma21Q78T54 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.79□□□□□ -0.84
Vma21Q78T54 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms