Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gm26047-201ENSMUST00000157308 113 ntBASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Mir6998-201ENSMUST00000183343 64 ntBASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gm26047-202ENSMUST00000198840 115 ntBASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.98□□□□□ -0.17
Nup98Q6PFD9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm25148-201ENSMUST00000104611 123 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm23153-201ENSMUST00000175323 313 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm45594-201ENSMUST00000211717 241 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm13182-201ENSMUST00000122241 312 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm8197-202ENSMUST00000193422 934 ntBASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup98Q6PFD9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Gm25766-201ENSMUST00000104101 131 ntBASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms