Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Gm27552-201ENSMUST00000183351 62 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Gm27844-201ENSMUST00000183613 62 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Gm37666-201ENSMUST00000194110 866 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Cog3-203ENSMUST00000227473 4197 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Slc46a1Q6PEM8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm15711-201ENSMUST00000118889 535 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm11331-201ENSMUST00000119764 288 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm12266-201ENSMUST00000120311 962 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm23119-201ENSMUST00000158610 140 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm17040-202ENSMUST00000170597 889 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Mir3547-201ENSMUST00000175461 88 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm28071-201ENSMUST00000190355 478 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm43378-201ENSMUST00000199336 582 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 AY036118-201ENSMUST00000200021 923 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm42997-202ENSMUST00000200321 985 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm19994-201ENSMUST00000217086 586 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.67□□□□□ -0.7
Slc46a1Q6PEM8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms