Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf220Q6PDX6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm6458-201ENSMUST00000211573 635 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm15823-201ENSMUST00000064305 670 ntBASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf220Q6PDX6 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms