Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Gm12194-201ENSMUST00000117756 1012 ntBASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Gm15620-201ENSMUST00000122949 270 ntBASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Gm42655-201ENSMUST00000202782 1134 ntBASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC18.23■□□□□ 0.51
Slx4Q6P1D7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Gm26976-201ENSMUST00000182929 908 ntBASIC18.22■□□□□ 0.51
Slx4Q6P1D7 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Gm8181-201ENSMUST00000062242 669 ntBASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Slx4Q6P1D7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm23612-201ENSMUST00000103823 110 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm11957-201ENSMUST00000118304 779 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gng5-ps-201ENSMUST00000120931 205 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm23576-201ENSMUST00000179918 110 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Trav11n-201ENSMUST00000200113 343 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm14441-201ENSMUST00000121960 540 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm7741-201ENSMUST00000181445 989 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Olfr692-202ENSMUST00000217827 1126 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm7525-201ENSMUST00000219425 454 ntBASIC18.21■□□□□ 0.51
Slx4Q6P1D7 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slx4Q6P1D7 Gm7224-201ENSMUST00000121359 2066 ntBASIC18.21■□□□□ 0.5
Slx4Q6P1D7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Slx4Q6P1D7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms