Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm12241-201ENSMUST00000118330 726 ntBASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm5706-201ENSMUST00000181525 993 ntBASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gm9368-201ENSMUST00000219348 831 ntBASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sp140Q6NSQ5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms