Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.69□□□□□ -0.7
Sqstm1Q64337 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Gm13123-201ENSMUST00000122173 492 ntBASIC10.69□□□□□ -0.7
Sqstm1Q64337 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Gm16215-201ENSMUST00000161990 637 ntBASIC10.69□□□□□ -0.7
Sqstm1Q64337 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.69□□□□□ -0.7
Sqstm1Q64337 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.69□□□□□ -0.7
Sqstm1Q64337 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.69□□□□□ -0.7
Sqstm1Q64337 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.68□□□□□ -0.7
Sqstm1Q64337 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm22189-201ENSMUST00000103822 86 ntBASIC10.68□□□□□ -0.7
Sqstm1Q64337 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Mir6977-201ENSMUST00000184960 64 ntBASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm9136-201ENSMUST00000193368 454 ntBASIC10.68□□□□□ -0.7
Sqstm1Q64337 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.68□□□□□ -0.7
Sqstm1Q64337 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.68□□□□□ -0.7
Sqstm1Q64337 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sqstm1Q64337 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sqstm1Q64337 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms