Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
AtmQ62388 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
AtmQ62388 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
AtmQ62388 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Gm13094-201ENSMUST00000117930 409 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Gm11736-201ENSMUST00000121468 505 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Gm37207-201ENSMUST00000194284 296 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Gm43726-201ENSMUST00000199110 775 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.11□□□□□ -0.63
AtmQ62388 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.11□□□□□ -0.63
AtmQ62388 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
AtmQ62388 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
AtmQ62388 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Gm27826-201ENSMUST00000175282 255 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.11□□□□□ -0.63
AtmQ62388 BC080696-201ENSMUST00000202858 1218 ntBASIC11.11□□□□□ -0.63
AtmQ62388 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.11□□□□□ -0.63
AtmQ62388 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
AtmQ62388 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AtmQ62388 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
AtmQ62388 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Gm8181-201ENSMUST00000062242 669 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
AtmQ62388 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
AtmQ62388 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.1□□□□□ -0.63
AtmQ62388 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.1□□□□□ -0.63
AtmQ62388 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.1□□□□□ -0.63
AtmQ62388 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
AtmQ62388 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.1□□□□□ -0.63
AtmQ62388 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Gm9081-201ENSMUST00000182346 991 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Gm33707-201ENSMUST00000195135 569 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Gm43671-201ENSMUST00000200422 433 ntBASIC11.1□□□□□ -0.63
AtmQ62388 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.1□□□□□ -0.63
AtmQ62388 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AtmQ62388 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms