Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Ift88Q61371 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.32□□□□□ -0.28
Ift88Q61371 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ift88Q61371 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.31□□□□□ -0.28
Ift88Q61371 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.31□□□□□ -0.28
Ift88Q61371 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ift88Q61371 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Gm14247-201ENSMUST00000120950 237 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.31□□□□□ -0.28
Ift88Q61371 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.31□□□□□ -0.28
Ift88Q61371 Rprl1-201ENSMUST00000158050 327 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Gm17150-201ENSMUST00000165577 381 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Gm27731-201ENSMUST00000185192 107 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
Ift88Q61371 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ift88Q61371 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.31□□□□□ -0.28
Ift88Q61371 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ift88Q61371 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.3□□□□□ -0.28
Ift88Q61371 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.3□□□□□ -0.28
Ift88Q61371 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.3□□□□□ -0.28
Ift88Q61371 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.3□□□□□ -0.28
Ift88Q61371 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.3□□□□□ -0.28
Ift88Q61371 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.3□□□□□ -0.28
Ift88Q61371 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.3□□□□□ -0.28
Ift88Q61371 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Gm6266-201ENSMUST00000203844 806 ntBASIC13.3□□□□□ -0.28
Ift88Q61371 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.3□□□□□ -0.28
Ift88Q61371 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ift88Q61371 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ift88Q61371 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ift88Q61371 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ift88Q61371 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms