Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm12439-201ENSMUST00000117162 365 ntBASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm15004-201ENSMUST00000119192 630 ntBASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm45909-201ENSMUST00000212413 1031 ntBASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gm3619-201ENSMUST00000219947 775 ntBASIC20.98■□□□□ 0.95
Trim41Q5NCC3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim41Q5NCC3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm15626-201ENSMUST00000117478 868 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm25116-201ENSMUST00000157191 122 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm4034-201ENSMUST00000187674 480 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm37299-201ENSMUST00000193951 826 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm5870-201ENSMUST00000196461 282 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm17831-201ENSMUST00000205579 900 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Olfr692-202ENSMUST00000217827 1126 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 AC122408.1-201ENSMUST00000218949 218 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 AC158388.3-202ENSMUST00000225517 775 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Gm9785-201ENSMUST00000062642 1006 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim41Q5NCC3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm2420-201ENSMUST00000119864 2149 ntBASIC20.96■□□□□ 0.95
Trim41Q5NCC3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm12337-201ENSMUST00000119634 400 ntBASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm38228-201ENSMUST00000193169 1293 ntBASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm7395-201ENSMUST00000216059 1045 ntBASIC20.96■□□□□ 0.95
Trim41Q5NCC3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim41Q5NCC3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms