Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm2651-201ENSMUST00000203560 838 ntBASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Rn7sk-201ENSMUST00000083103 331 ntBASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm26315-201ENSMUST00000083890 321 ntBASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1brtQ3UNC9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1brtQ3UNC9 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms