Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm12745-201ENSMUST00000121767 214 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm20945-201ENSMUST00000178122 1145 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm16574-201ENSMUST00000159301 745 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 AC170810.2-201ENSMUST00000228384 1232 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Olfr15-201ENSMUST00000080917 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Snord23-201ENSMUST00000116828 109 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm14108-201ENSMUST00000122234 494 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm9192-201ENSMUST00000183221 985 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm5668-201ENSMUST00000220897 436 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 AC105950.2-201ENSMUST00000220938 368 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm45110-201ENSMUST00000205704 1402 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm1840-201ENSMUST00000051687 1432 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm12904-201ENSMUST00000117451 1399 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm23497-201ENSMUST00000157738 130 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm28671-201ENSMUST00000187036 692 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm18165-201ENSMUST00000217426 928 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Gm7589-201ENSMUST00000085631 534 ntBASIC6.15□□□□□ -1.42
Ush2AQ2QI47 Ap5m1-205ENSMUST00000227431 3757 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm44167-201ENSMUST00000204957 1878 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms