Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.91□□□□□ -0.5
Atf4Q06507 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Atf4Q06507 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.91□□□□□ -0.5
Atf4Q06507 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf4Q06507 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Atf4Q06507 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.9□□□□□ -0.5
Atf4Q06507 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Atf4Q06507 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Gm8738-201ENSMUST00000172606 329 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Gm18300-201ENSMUST00000192792 1406 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 AA914427-201ENSMUST00000193194 1166 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 Gm44712-201ENSMUST00000206250 1076 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 Gm44967-201ENSMUST00000207047 631 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Atf4Q06507 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Atf4Q06507 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Atf4Q06507 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.9□□□□□ -0.5
Atf4Q06507 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf4Q06507 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.9□□□□□ -0.5
Atf4Q06507 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Atf4Q06507 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Atf4Q06507 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Gm44509-201ENSMUST00000205400 1324 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atf4Q06507 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.89□□□□□ -0.51
Atf4Q06507 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atf4Q06507 Gm13665-201ENSMUST00000120830 528 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Gm14277-201ENSMUST00000121195 360 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.89□□□□□ -0.51
Atf4Q06507 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Atf4Q06507 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atf4Q06507 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC11.89□□□□□ -0.51
Atf4Q06507 Gm29161-201ENSMUST00000188250 699 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Gm28693-202ENSMUST00000190758 331 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf4Q06507 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC11.89□□□□□ -0.51
Atf4Q06507 Gm44849-201ENSMUST00000207595 484 ntBASIC11.89□□□□□ -0.51
Atf4Q06507 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms