Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Smn1P97801 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Smn1P97801 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Smn1P97801 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smn1P97801 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smn1P97801 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.31□□□□□ -0.76
Smn1P97801 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm27486-201ENSMUST00000184923 80 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm39404-201ENSMUST00000216350 313 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Gm45925-201ENSMUST00000218882 744 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.31□□□□□ -0.76
Smn1P97801 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.31□□□□□ -0.76
Smn1P97801 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm25007-201ENSMUST00000083808 133 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smn1P97801 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.31□□□□□ -0.76
Smn1P97801 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.31□□□□□ -0.76
Smn1P97801 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Smn1P97801 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smn1P97801 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Smn1P97801 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.3□□□□□ -0.76
Smn1P97801 Gm12138-201ENSMUST00000122180 951 ntBASIC10.3□□□□□ -0.76
Smn1P97801 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.3□□□□□ -0.76
Smn1P97801 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smn1P97801 Gm9136-201ENSMUST00000193368 454 ntBASIC10.3□□□□□ -0.76
Smn1P97801 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms